Welcome to NetSci's
List of Macromolecular Structure Resources

This section of NetSci provides a starting point to explore the resources available for science on the Web. Please notify us if you have found a site that is interesting. Websites currently include:

2D Data for Proteins

3D Data for Proteins

2D Data for Nucleic Acids

3D Data for Nucleic Acids

General Data and Tools





 

2D Proteins



The EC Enzyme Database - contains EC number, recommended and alternative names, catalytic activity, cofactors, pointers to corresponding SWISS-PROT entrie(s) and to the disease(s) associated with a deficiency of the enzyme

The FSSP Database - structurally aligned protein fold families

Protein Domain Database - a searchable, comprehensive collection of protein families (by domains)

Guide to Protein Structure Prediction by Robert Russell of the Imperial Cancer Research Fund

Guide to Guide to Protein Structure Prediction by Robert Russell of the Imperial Cancer Research Fund

OWL Database - the non-redundant protein sequence database produced from SWISSPROT, PIR, GenBank, and NRL-3D.

Prot-Web - a list of other protein databases

Structural Classification of Proteins - structural and evolutionary relationships between proteins

The SWISS-PROT Database in Switzerland - protein sequence database with high level of annotations





 

3D Proteins



The Backbone-Dependent Rotamer Library Webpage - a program for making and evaluating sidechain conformation predictions

Brookhaven Protein Databank - the official repository for protein X-ray and NMR structure coordinates maintained at Brookhaven National Laboratory. There is a searching interface with retreival in text, image or interactive form

Entrez MMDB - an explicit 3D structure database, based on crystallographic and NMR structure determinations

HIV Protease Database

Molecules R Us - full text search of the PDB database with a FORM interface to customize the format (TEXT, IMAGE, INTERACTIVE) of the selected structure

Swiss 3D Image Collection - cartoon images of proteins (.gif, .jpeg and .rgb formats) and links to downloadable viewers for Macintosh, Windows, and SGI





 

2D Nucleic Acids



GenBank - searchable NIH genetic sequence database

The GenoBase Server at the National Institutes of Health (NIH)





 

3D Nucleic Acids



Rutgers Nucleic Acid Database Project - assembles and distributes structural information about nucleic acids





 

General Data and Tools



Biological Macromolecule Crystallization Database - crystal data and crystallization conditions compiled from the literature for 2353 crystal entries from 1557 biological macromolecules

Biology Workbench

PROWL - resources for protein chemistry and mass spectrometry

The Restriction Enzyme Database (REBASE)



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