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Welcome to NetSci's
List of Macromolecular Structure Resources

This section of NetSci provides a starting point to explore the resources available for science on the Web. Please notify us if you have found a site that is interesting. Websites currently include:

2D Data for Proteins
3D Data for Proteins
2D Data for Nucleic Acids
3D Data for Nucleic Acids
General Data and Tools
 

2D Proteins

The EC Enzyme Database - contains EC number, recommended and alternative names, catalytic activity, cofactors, pointers to corresponding SWISS-PROT entrie(s) and to the disease(s) associated with a deficiency of the enzyme
The FSSP Database - structurally aligned protein fold families
Protein Domain Database - a searchable, comprehensive collection of protein families (by domains)
Guide to Protein Structure Prediction by Robert Russell of the Imperial Cancer Research Fund
Guide to Guide to Protein Structure Prediction by Robert Russell of the Imperial Cancer Research Fund
OWL Database - the non-redundant protein sequence database produced from SWISSPROT, PIR, GenBank, and NRL-3D.
Prot-Web - a list of other protein databases
Structural Classification of Proteins - structural and evolutionary relationships between proteins
The SWISS-PROT Database in Switzerland - protein sequence database with high level of annotations
 

3D Proteins

The Backbone-Dependent Rotamer Library Webpage - a program for making and evaluating sidechain conformation predictions
Brookhaven Protein Databank - the official repository for protein X-ray and NMR structure coordinates maintained at Brookhaven National Laboratory. There is a searching interface with retreival in text, image or interactive form
Entrez MMDB - an explicit 3D structure database, based on crystallographic and NMR structure determinations
HIV Protease Database
Molecules R Us - full text search of the PDB database with a FORM interface to customize the format (TEXT, IMAGE, INTERACTIVE) of the selected structure
Swiss 3D Image Collection - cartoon images of proteins (.gif, .jpeg and .rgb formats) and links to downloadable viewers for Macintosh, Windows, and SGI
 

2D Nucleic Acids

GenBank - searchable NIH genetic sequence database
The GenoBase Server at the National Institutes of Health (NIH)
 

3D Nucleic Acids

Rutgers Nucleic Acid Database Project - assembles and distributes structural information about nucleic acids
 

General Data and Tools

Biological Macromolecule Crystallization Database - crystal data and crystallization conditions compiled from the literature for 2353 crystal entries from 1557 biological macromolecules
Biology Workbench
PROWL - resources for protein chemistry and mass spectrometry
The Restriction Enzyme Database (REBASE)

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